//| Copyright Inria May 2015 //| This project has received funding from the European Research Council (ERC) under //| the European Union's Horizon 2020 research and innovation programme (grant //| agreement No 637972) - see http://www.resibots.eu //| //| Contributor(s): //| - Jean-Baptiste Mouret (jean-baptiste.mouret@inria.fr) //| - Antoine Cully (antoinecully@gmail.com) //| - Konstantinos Chatzilygeroudis (konstantinos.chatzilygeroudis@inria.fr) //| - Federico Allocati (fede.allocati@gmail.com) //| - Vaios Papaspyros (b.papaspyros@gmail.com) //| - Roberto Rama (bertoski@gmail.com) //| //| This software is a computer library whose purpose is to optimize continuous, //| black-box functions. It mainly implements Gaussian processes and Bayesian //| optimization. //| Main repository: http://github.com/resibots/limbo //| Documentation: http://www.resibots.eu/limbo //| //| This software is governed by the CeCILL-C license under French law and //| abiding by the rules of distribution of free software. You can use, //| modify and/ or redistribute the software under the terms of the CeCILL-C //| license as circulated by CEA, CNRS and INRIA at the following URL //| "http://www.cecill.info". //| //| As a counterpart to the access to the source code and rights to copy, //| modify and redistribute granted by the license, users are provided only //| with a limited warranty and the software's author, the holder of the //| economic rights, and the successive licensors have only limited //| liability. //| //| In this respect, the user's attention is drawn to the risks associated //| with loading, using, modifying and/or developing or reproducing the //| software by the user in light of its specific status of free software, //| that may mean that it is complicated to manipulate, and that also //| therefore means that it is reserved for developers and experienced //| professionals having in-depth computer knowledge. Users are therefore //| encouraged to load and test the software's suitability as regards their //| requirements in conditions enabling the security of their systems and/or //| data to be ensured and, more generally, to use and operate it in the //| same conditions as regards security. //| //| The fact that you are presently reading this means that you have had //| knowledge of the CeCILL-C license and that you accept its terms. //| #include #include #include #include // Quick hack for definition of 'I' in #undef I #include #include namespace limbo { namespace serialize { class TextArchive { public: TextArchive(const std::string& dir_name) : _dir_name(dir_name), _fmt(Eigen::FullPrecision, Eigen::DontAlignCols, " ", "\n", "", "") {} /// write an Eigen::Matrix* void save(const Eigen::MatrixXd& v, const std::string& object_name) const { _create_directory(); std::ofstream ofs(fname(object_name).c_str()); ofs << v.format(_fmt) << std::endl; } /// write a vector of Eigen::Vector* template void save(const std::vector& v, const std::string& object_name) const { _create_directory(); std::ofstream ofs(fname(object_name).c_str()); for (auto& x : v) { ofs << x.transpose().format(_fmt) << std::endl; } } /// load an Eigen matrix (or vector) template void load(M& m, const std::string& object_name) const { auto values = _load(object_name); m.resize(values.size(), values[0].size()); for (size_t i = 0; i < values.size(); ++i) for (size_t j = 0; j < values[i].size(); ++j) m(i, j) = values[i][j]; } /// load a vector of Eigen::Vector* template void load(std::vector& m_list, const std::string& object_name) const { m_list.clear(); auto values = _load(object_name); assert(!values.empty()); for (size_t i = 0; i < values.size(); ++i) { V v(values[i].size()); for (size_t j = 0; j < values[i].size(); ++j) v(j) = values[i][j]; m_list.push_back(v); } assert(!m_list.empty()); } std::string fname(const std::string& object_name) const { return _dir_name + "/" + object_name + ".dat"; } const std::string& directory() const { return _dir_name; } protected: std::string _dir_name; Eigen::IOFormat _fmt; void _create_directory() const { boost::filesystem::path my_path(_dir_name); boost::filesystem::create_directory(my_path); } std::vector> _load(const std::string& object_name) const { std::ifstream ifs(fname(object_name).c_str()); assert(ifs.good() && "file not found"); std::string line; std::vector> v; while (std::getline(ifs, line)) { std::stringstream line_stream(line); std::string cell; std::vector line; while (std::getline(line_stream, cell, ' ')) line.push_back(std::stod(cell)); v.push_back(line); } assert(!v.empty() && "empty file"); return v; } }; } // namespace serialize } // namespace limbo