Cleaned includes in all files except the multi objectivo BO

src/limbo/acqui/ehvi.hpp

 #ifndef LIMBO_ACQUI_EHVI_HPP
 #define LIMBO_ACQUI_EHVI_HPP
 
+#include <Eigen/Core>
+
 #include <ehvi/ehvi_calculations.h>
 
 namespace limbo {

src/limbo/acqui/gp_ucb.hpp

@@ -3,6 +3,8 @@
 
 #include <Eigen/Core>
 
+#include <limbo/tools/macros.hpp>
+
 namespace limbo {
 
     namespace defaults {

src/limbo/acqui/ucb.hpp

@@ -3,6 +3,8 @@
 
 #include <Eigen/Core>
 
+#include <limbo/tools/macros.hpp>
+
 namespace limbo {
 
     namespace defaults {

src/limbo/bayes_opt/bo_base.hpp

@@ -3,16 +3,16 @@
 #define BOOST_PARAMETER_MAX_ARITY 7
 #include <vector>
 #include <iostream>
+#include <limits>
+
 #include <boost/parameter.hpp>
 #include <boost/fusion/include/vector.hpp>
 #include <boost/fusion/include/accumulate.hpp>
 #include <boost/fusion/include/for_each.hpp>
-
 #define BOOST_NO_SCOPED_ENUMS
 #include <boost/filesystem.hpp>
 
 #include <Eigen/Core>
-#include <limits>
 
 // we need everything to have the defaults
 #include <limbo/stop/chain_criteria.hpp>

src/limbo/bayes_opt/bo_multi.hpp

@@ -2,6 +2,8 @@
 #define LIMBO_BAYES_OPT_BO_MULTI_HPP
 #define VERSION "xxx"
 
+#include <Eigen/Core>
+
 #ifndef USE_SFERES
 #warning No sferes
 #else

src/limbo/bayes_opt/boptimizer.hpp

 #ifndef LIMBO_BAYES_OPT_BOPTIMIZER_HPP
 #define LIMBO_BAYES_OPT_BOPTIMIZER_HPP
 
-#include <limbo/bayes_opt/bo_base.hpp>
+#include <iostream>
+#include <algorithm>
+#include <iterator>
+#include <boost/parameter/aux_/void.hpp>
 #include <boost/range/adaptor/transformed.hpp>
 
+#include <Eigen/Core>
+
+#include <limbo/bayes_opt/bo_base.hpp>
+
 namespace limbo {
     namespace bayes_opt {
 

src/limbo/bayes_opt/ehvi.hpp

@@ -2,8 +2,10 @@
 #define LIMBO_BAYES_OPT_EHVI_HPP
 
 #include <algorithm>
+
 #include <limbo/bayes_opt/bo_multi.hpp>
 #include <limbo/acqui/ehvi.hpp>
+
 #include <ehvi/ehvi_calculations.h>
 #include <ehvi/ehvi_sliceupdate.h>
 

src/limbo/bayes_opt/nsbo.hpp

@@ -2,6 +2,7 @@
 #define LIMBO_BAYES_OPT_NSBO_HPP
 
 #include <algorithm>
+
 #include <limbo/bayes_opt/bo_multi.hpp>
 
 namespace limbo {

src/limbo/bayes_opt/parego.hpp

@@ -2,6 +2,7 @@
 #define LIMBO_BAYES_OPT_PAREGO_HPP
 
 #include <algorithm>
+
 #include <limbo/limbo.hpp>
 #include <limbo/bayes_opt/bo_multi.hpp>
 

src/limbo/bayes_opt/pareto.hpp

@@ -2,6 +2,7 @@
 #define LIMBO_BAYES_OPT_PARETO_HPP
 
 #include <algorithm>
+
 #include <limbo/tools/parallel.hpp>
 
 namespace pareto {

src/limbo/init/random_sampling.hpp

@@ -2,6 +2,7 @@
 #define LIMBO_INIT_RANDOM_SAMPLING_HPP
 
 #include <Eigen/Core>
+
 #include <limbo/tools/rand.hpp>
 
 namespace limbo {

src/limbo/inner_opt/cmaes.hpp

@@ -3,16 +3,17 @@
 
 #include <vector>
 #include <iostream>
-#include <Eigen/Core>
 #include <limits>
-
 #include <stdio.h>
 #include <stdlib.h> /* free() */
 #include <stddef.h> /* NULL */
 
+#include <Eigen/Core>
+
+#include <limbo/tools/parallel.hpp>
+
 #include <cmaes/cmaes_interface.h>
 #include <cmaes/boundary_transformation.h>
-#include <limbo/tools/parallel.hpp>
 
 namespace limbo {
 

src/limbo/inner_opt/exhaustive_search.hpp

 #ifndef LIMBO_INNER_OPTI_EXHAUSTIVE_SEARCH_HPP
 #define LIMBO_INNER_OPTI_EXHAUSTIVE_SEARCH_HPP
 
-#include <Eigen/Core>
 #include <limits>
 
+#include <Eigen/Core>
+
 namespace limbo {
     namespace inner_opt {
         template <typename Params>

src/limbo/model/gp.hpp

@@ -3,13 +3,11 @@
 
 #include <iostream>
 #include <cassert>
+#include <limits>
+
 #include <Eigen/Core>
 #include <Eigen/LU>
 #include <Eigen/Cholesky>
-#include <limits>
-
-#include <limbo/kernel_fun.hpp>
-#include <limbo/mean_fun.hpp>
 
 namespace limbo {
     namespace model {

src/limbo/model/gp_auto.hpp

 #ifndef LIMBO_MODEL_GP_AUTO_HPP
 #define LIMBO_MODEL_GP_AUTO_HPP
 
-#include <limits>
+#include <iostream>
 #include <cassert>
-#include <tbb/parallel_reduce.h>
+#include <limits>
+
 #include <Eigen/Core>
 #include <Eigen/LU>
-#include <Eigen/Dense>
 #include <Eigen/Cholesky>
-#include <Eigen/LU>
 
+#include <limbo/tools/macros.hpp>
 #include <limbo/model/gp.hpp>
 #include <limbo/opt/rprop.hpp>
 #include <limbo/tools/parallel.hpp>

src/limbo/model/gp_auto_mean.hpp

 #ifndef LIMBO_MODEL_GP_AUTO_MEAN_HPP
 #define LIMBO_MODEL_GP_AUTO_MEAN_HPP
 
-#include <limits>
+#include <iostream>
 #include <cassert>
-#include <tbb/parallel_reduce.h>
+#include <limits>
+
 #include <Eigen/Core>
 #include <Eigen/LU>
-#include <Eigen/Dense>
 #include <Eigen/Cholesky>
-#include <Eigen/LU>
 
+#include <limbo/tools/macros.hpp>
 #include <limbo/model/gp.hpp>
 #include <limbo/opt/rprop.hpp>
 #include <limbo/tools/parallel.hpp>

src/limbo/opt/rprop.hpp

 #ifndef LIMBO_OPT_RPROP_HPP
 #define LIMBO_OPT_RPROP_HPP
 
-#include <Eigen/Core>
+#include <algorithm>
+
 #include <boost/math/special_functions/sign.hpp>
 
+#include <Eigen/Core>
+
 namespace opt {
     // partly inspired by libgp: https://github.com/mblum/libgp
     // reference :

src/limbo/stat/acquisitions.hpp

 #ifndef LIMBO_STAT_ACQUISITIONS_HPP
 #define LIMBO_STAT_ACQUISITIONS_HPP
 
-#include <fstream>
-#include <string>
 #include <limbo/stat/stat.hpp>
 
 namespace limbo {

src/limbo/stat/stat.hpp

@@ -3,6 +3,7 @@
 
 #include <fstream>
 #include <string>
+
 #include <boost/shared_ptr.hpp>
 
 namespace limbo {

src/limbo/stop/max_predicted_value.hpp

@@ -3,6 +3,11 @@
 
 #include <iostream>
 
+#include <Eigen/Core>
+
+#include <limbo/tools/macros.hpp>
+#include <limbo/stat/stat.hpp>
+
 namespace limbo {
 
     namespace defaults {